Index

This code was produced by Simon Thomas, graduate student in the AI4ER CDT at the University of Cambridge.

Contents:

• Index
• Finding the potential height of tropical cyclone storm surges in a changing climate using Bayesian optimization
  • Modules
    • tcpips
    • w22
    • cle15
    • adforce
    • adbo
    • worst
    • surgenet
  • Repository layout
  • Getting started
  • Citations
• tcpips package
  • Submodules
  • tcpips.ani module
    • ani_example()
  • tcpips.bias module
    • calc_bias()
    • example_new_orleans_plot()
    • load_cmip6_data()
    • read_ensemble_for_point_var()
  • tcpips.constants module
  • tcpips.convert module
    • convert()
  • tcpips.dask_utils module
    • dask_cluster_wrapper()
  • tcpips.driver module
    • loop_through_all()
  • tcpips.era5 module
    • assign_coordinate_attributes()
    • calculate_potential_sizes()
    • call_cdo()
    • download_era5_data()
    • download_pressure_levels()
    • download_single_levels()
    • era5_pi()
    • era5_pi_decade()
    • era5_pi_trends()
    • era5_ps_trends()
    • find_tropical_m()
    • fix_era5_pi_decade()
    • get_all_data()
    • get_all_regridded_data()
    • get_era5_combined()
    • get_era5_coordinates()
    • get_era5_pi()
    • plot_snapshot_map()
    • plot_trend_lineplots()
    • plot_trend_maps()
    • plot_trends_all_lineplots()
    • plot_var_on_map()
    • preprocess_pressure_level_data()
    • preprocess_single_level_data()
    • rechunk_file()
    • regrid_all()
    • select_seasonal_hemispheric_data()
    • trend_with_neweywest_full()
  • tcpips.era5_ps_calc module
    • process_large_dataset_ex()
    • run_ps_calc()
  • tcpips.files module
    • file_crawler()
    • find_atmos_ocean_pairs()
    • find_missing_raw_cmip6_nc()
    • get_task_dict()
    • hist_dict_plot()
    • histogram_dict_from_file_dict()
    • investigate_cmip6_pairs()
    • locker()
  • tcpips.ibtracs module
    • add_pi_ps_back_onto_tracks()
    • add_saffir_simpson_boundaries()
    • ani_vary_v_cps()
    • before_2025()
    • calculate_cps()
    • calculate_cps_ds()
    • calculate_grid_avg_over_ibtracs_points()
    • calculate_grid_avg_over_unique_points()
    • calculate_potential_intensity()
    • calculate_potential_size()
    • calculate_potential_size_cat1()
    • check_sizes()
    • compare_normalized_potential_size()
    • create_exceedance_table()
    • create_normalized_variables()
    • download_ibtracs_data()
    • era5_unique_points_raw()
    • filter_by_labels()
    • get_exceedance_val()
    • get_normalized_data()
    • get_tc_ds()
    • get_vary_vobs_lower_data()
    • get_vary_vp_lower_data()
    • highlight_rapid_intensification()
    • ibtracs_to_era5_map()
    • landings_only()
    • na_landing_tcs()
    • plot_cps()
    • plot_era5_processed()
    • plot_example_raw()
    • plot_normalized_cps()
    • plot_normalized_quad()
    • plot_normalized_quad_dual()
    • plot_normalized_variables()
    • plot_potential_intensity()
    • plot_potential_size()
    • plot_tc_example()
    • plot_tc_track_by_index()
    • plot_unique_points()
    • plot_var_on_map()
    • process_era5_raw()
    • run_all_plots()
    • save_basin_names()
    • select_tc_from_ds()
    • vary_limits()
    • vary_v_cps()
  • tcpips.pangeo module
    • cmd_download_call()
    • combined_experiments_from_cat_subset()
    • combined_experiments_from_dset_dict()
    • get_data_pair()
    • get_data_part()
  • tcpips.pi module
    • calculate_pi()
    • fix_profile()
    • reconstruct_profile_well_mixed()
  • tcpips.pi_driver module
  • tcpips.plot module
    • plot_features()
  • tcpips.ps_driver module
  • tcpips.regrid module
  • tcpips.regrid_cdo module
    • call_cdo()
  • tcpips.rh module
    • relative_humidity_from_dew_point()
    • saturation_pressure()
  • tcpips.run_dask_calculation module
  • tcpips.simple_sensitivity module
    • simple_sensitivity()
  • tcpips.xr_utils module
    • propagate_attrs()
    • propagate_wrapper()
    • standard_name_to_long_name()
  • Module contents
• w22 package
  • Submodules
  • w22.constants module
  • w22.plot module
    • dataframe_to_latex_table()
    • figure_two()
    • get_cmip6_timeseries()
    • get_era5_timeseries()
    • get_timeseries()
    • multipanel()
    • place_to_position()
    • plot_era5_timeseries()
    • plot_panels()
    • plot_seasonal_profiles()
    • plot_spatials()
    • plot_timeserii()
    • plot_two_spatial()
    • plot_two_timeseries()
    • safe_corr()
    • safe_grad()
    • temporal_relationship_data()
    • timeseries_plot()
    • timeseries_relationships()
  • w22.ps module
    • calculate_ps13_ufunc()
    • calculate_ps_ufunc()
    • create_test_dataset()
    • multi_point_example_1d()
    • multi_point_example_2d()
    • parallelized_ps()
    • parallelized_ps13_dask()
    • parallelized_ps_dask()
    • point_solution_ps()
    • single_point_example()
    • test_equivalence_across_dimensionalities()
  • w22.ps_runs module
    • ex_data_path()
    • get_processed_data_for_point()
    • get_regional_processed_data()
    • global_cmip6()
    • load_global()
    • new_orleans_10year()
    • point_era5_timeseries()
    • point_timeseries()
    • spatial_example()
  • w22.solve module
    • bisection()
  • w22.stats module
    • analyze_bias()
    • calculate_detrended_cv()
    • dataframe_to_latex_table()
    • format_error_latex_sci()
    • format_single_latex_sci()
    • safe_corr()
    • safe_grad()
    • temporal_relationship_data()
    • timeseries_relationships()
  • w22.stats2 module
    • analyze_bias()
    • analyze_bias_mixed_model()
    • analyze_bias_newey_west_ensemble()
    • calculate_detrended_cv()
    • dataframe_to_latex_table()
    • format_error_latex_sci()
    • format_single_latex_sci()
    • generate_assessment_tables()
    • generate_future_trend_table()
    • generate_mixed_model_assessment_tables()
    • generate_newey_west_assessment_tables()
    • generate_wide_assessment_tables()
    • p_to_str()
    • safe_corr()
    • safe_grad()
    • temporal_relationship_data()
    • timeseries_relationships()
    • trend_with_neweywest_full()
    • wide_dataframe_to_latex()
  • w22.test module
    • make_matlab_v_python_plot()
    • octave_vs_python()
    • q_gibbs()
    • q_s()
    • test_figure_4()
    • test_figure_5()
    • v_carnot()
    • w_out()
    • w_p()
    • w_pbl()
  • w22.utils module
    • absolute_angular_momentum()
    • buck_sat_vap_pressure()
    • carnot_efficiency()
    • coriolis_parameter_from_lat()
    • curveintersect()
    • pressure_from_wind()
    • qair2rh()
    • qtp2rh()
    • rho_air_f()
  • w22.w22_carnot module
    • wang_carnot_velocity()
    • wang_consts()
    • wang_diff()
    • wang_outer_radius_approx()
  • Module contents
• adforce package
  • Submodules
  • adforce.ani module
    • ani_heights()
    • ani_heights_and_winds()
    • find_starttime_of_impact()
    • line_up_f22()
    • plot_locations()
    • plot_trajectory()
    • plot_u10_windx_at_a_point()
    • regenerate_fort22_if_does_not_exist()
    • run_animation()
    • single_wind_and_height_step()
  • adforce.boundaries module
    • extract_elevation_boundary_edges()
    • find_boundaries_in_fort63()
  • adforce.check_training_runs module
    • status_list()
  • adforce.config module
    • ChavasCollision
    • ChavasCollision
    • load_config()
    • save_config()
  • adforce.constants module
  • adforce.dual_graph module
    • make_dual_graph_nc()
    • plot_dual_graph()
    • plot_swegnn_ghost_cells()
    • test_dual_graph()
  • adforce.fort22 module
    • add_psfc_u10()
    • clon_clat_from_config_and_times()
    • create_fort22()
    • gen_ps_f()
    • moving_rectilinear_square()
    • plot_trajectories()
    • rectilinear_square()
  • adforce.fort22datatree module
    • read_fort22()
  • adforce.fort61 module
    • plot_model_tgauges()
  • adforce.fort63 module
    • kat2()
    • plot_nearby()
    • plot_quiver_height()
  • adforce.generate_training_data module
  • adforce.geo module
    • distances_bearings_to_center_pyproj()
    • distances_bearings_to_center_sphere()
    • forward_point_sphere()
    • haversine_dist_bearing()
    • line_with_impact_pyproj()
    • line_with_impact_sphere()
    • parabolic_track_with_impact_pyproj()
    • parabolic_track_with_impact_sphere()
  • adforce.mesh module
    • bbox_mesh()
    • calc_ghost_cells_for_swegnn()
    • calculate_adjacency_matrix()
    • calculate_boundary_edge_lengths()
    • calculate_dual_graph_adjacency_matrix()
    • calculate_ghost_face_coords()
    • calculate_ghost_node_coords()
    • calculate_outward_normals()
    • calculate_triangle_areas()
    • dual_graph_ds_base_from_triangles()
    • dual_graph_ds_from_mesh_ds()
    • dual_graph_ds_from_mesh_ds_from_path()
    • dual_graph_starts_ends_from_triangles()
    • elevation_boundary_edges()
    • filter_dual_graph()
    • filter_mesh()
    • find_boundary_faces()
    • find_non_boundary_nodes_for_faces()
    • get_boundary_edge_midpoints()
    • get_elevation_boundary_edges()
    • grad_for_triangle_static()
    • grad_for_triangle_timeseries()
    • mean_for_triangle()
    • plot_contour()
    • select_coast()
    • select_coast_mesh()
    • select_nearby()
    • standard_starts_ends_from_triangles()
    • starts_ends_to_adjacency_matrix()
    • swegnn_dg_from_mesh_ds_from_path()
    • swegnn_netcdf_creation()
    • xr_loader()
  • adforce.process_single module
    • check_and_process_run()
  • adforce.profile module
    • pressures_profile()
    • read_profile()
  • adforce.slurm module
    • is_slurm_job_failed()
    • is_slurm_job_finished()
    • setoff_slurm_job_and_wait()
  • adforce.subprocess module
    • setoff_subprocess_job_and_wait()
  • adforce.tc_plots module
    • plot_all_tc_tracks_on_mesh()
  • adforce.time module
    • datetime_to_time()
    • str_to_datetime()
    • str_to_time()
    • time_to_datetime()
    • unknown_to_time()
  • adforce.wrap module
    • get_default_config()
    • idealized_tc_observe()
    • main()
    • observe_max_point()
  • Module contents
• adbo package
  • Submodules
  • adbo.ani module
    • plot_gps()
  • adbo.constants module
  • adbo.create_test_set module
    • convert_best_bo_run_to_swegnn()
    • find_best_run_from_json()
    • process_all_bo_runs()
  • adbo.exp module
  • adbo.exp_1d module
  • adbo.exp_2d module
  • adbo.exp_3d module
  • adbo.gp_exp module
  • adbo.plot module
    • custom_parallel_coordinates()
    • find_argdifference()
    • find_argmax()
    • find_difference()
    • find_differences()
    • find_max()
    • get_max_from_ib_list()
    • listify()
    • make_argmax_table()
    • plot_bo_comp()
    • plot_bo_exp()
    • plot_diff()
    • plot_many()
    • plot_multi_argmax()
    • plot_places()
  • adbo.rescale module
    • rescale()
    • rescale_inverse()
    • test_rescale_test()
  • Module contents
• worst package
  • Submodules
  • worst.constants module
  • worst.sci module
    • bg_pdf()
    • evt_fig_scipy()
    • fit_gev()
    • fit_seeds()
    • gen_samples_from_gev()
    • get_evt_fit_data()
    • gev_pdf()
    • min_ll_bg()
    • plot_ex()
    • return_ll_beta_gamma()
    • try_fit()
    • try_fits()
  • worst.tens module
  • worst.utils module
    • alpha_from_z_star_beta_gamma()
    • bg_cdf()
    • plot_rp()
    • plot_sample_points()
    • retry_wrapper()
    • z_star_from_alpha_beta_gamma()
  • worst.vary_gamma_beta module
  • worst.vary_noise module
  • worst.vary_samples_ns module
  • Module contents

Indices and tables

• Index

• Module Index

• Search Page